I am sorry but I cannot reproduce the same behavior using the deployment project. Here are the steps that I try:
1. Create an empty web site
2. Add the webdeployment project to the web site.
3. Add two empty xml files to the project, say xmlfile.xml and xmlfile2.xml
4. Add couple pages and a .cs file to the app_code folder.
5. Compile the web site
6. Build the deployment project.
The two xml files are simply copied to the target folder, they are not merged. Could you tell me what I am doing differently?
Thanks,
Ting
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